STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46025.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (410 aa)    
Predicted Functional Partners:
EDR46024.1
Kinase domain protein; KEGG: rha:RHA1_ro03696 1.5e-23 probable serine/threonine protein kinase K08884; COG: COG0515 Serine/threonine protein kinase; Psort location: Cytoplasmic, score: 9.98.
       0.773
EDR46026.1
KEGG: cpt:CpB0409 2.7e-19 protein phosphatase K01090; COG: COG0631 Serine/threonine protein phosphatase; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR46023.1
Hypothetical protein.
       0.493
EDR46027.1
Hypothetical protein; KEGG: fth:FTH_0878 1.0e-21 clpX; endopeptidase Clp K01358; COG: COG1219 ATP-dependent protease Clp, ATPase subunit; Psort location: Cytoplasmic, score: 8.87.
       0.479
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.