STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46040.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.97. (236 aa)    
Predicted Functional Partners:
EDR46041.1
MobA/MobL family protein; KEGG: ret:RHE_PA00159 1.6e-16 traAa; conjugal transfer protein A K01144; COG: COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR46038.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bli:BL01653 1.0e-49 HPr serine phosphorylation site; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
       0.494
EDR46039.1
Response regulator receiver domain protein; KEGG: ava:Ava_3369 1.2e-34 two component transcriptional regulator, winged helix family; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.494
EDR46035.1
Hypothetical protein.
       0.429
EDR46036.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
       0.429
EDR46037.1
KEGG: fal:FRAAL1877 7.5e-40 putative ABC transporter ATP-binding protein; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.429
EDR46042.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.423
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.