STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46041.1MobA/MobL family protein; KEGG: ret:RHE_PA00159 1.6e-16 traAa; conjugal transfer protein A K01144; COG: COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; Psort location: Cytoplasmic, score: 8.87. (584 aa)    
Predicted Functional Partners:
EDR46044.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.797
EDR46040.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.97.
       0.773
EDR46970.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.742
EDR46045.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
 
     0.709
EDR48500.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.693
EDR46677.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.610
EDR48498.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: spj:MGAS2096_Spy1107 1.3e-42 two-component system histidine kinase; COG: COG0642 Signal transduction histidine kinase.
  
     0.593
EDR46437.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.577
EDR48087.1
Putative phage capsid family; COG: NOG20168 non supervised orthologous group.
  
     0.534
EDR48297.1
Hypothetical protein; KEGG: cal:orf19.575 4.1e-12 HYR5; similar to HYR1 K01186; COG: KOG1075 FOG: Reverse transcriptase; Psort location: Cellwall, score: 9.01.
  
    0.529
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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