STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR46051.1Addiction module antitoxin, RelB/DinJ family; COG: COG3077 DNA-damage-inducible protein J. (132 aa)    
Predicted Functional Partners:
EDR46052.1
Addiction module toxin, RelE/StbE family; Psort location: Cytoplasmic, score: 8.87.
 
 
   0.962
EDR47667.1
Addiction module toxin, RelE/StbE family; COG: COG3041 Uncharacterized protein conserved in bacteria.
 
 
 0.874
EDR45585.1
Addiction module toxin, RelE/StbE family; COG: NOG13941 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
 
   0.842
EDR47668.1
Addiction module antitoxin, RelB/DinJ family; COG: COG3077 DNA-damage-inducible protein J.
  
     0.604
EDR46053.1
Hypothetical protein; COG: COG5022 Myosin heavy chain; Psort location: CytoplasmicMembrane, score: 9.26.
       0.454
EDR47234.1
Plasmid stabilization system protein, RelE/ParE family.
 
 
   0.411
EDR46047.1
Hypothetical protein; KEGG: wol:WD0969 0.00022 NADH dehydrogenase I, N subunit, putative K00343; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
       0.404
EDR46048.1
KEGG: noc:Noc_2142 1.7e-35 ABC transporter, ATPase subunit; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
       0.404
EDR46049.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.97.
       0.404
EDR46050.1
Sigma-70 region 2; KEGG: reh:H16_A2563 5.8e-17 rpoE1; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; COG: COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. ECF subfamily.
       0.404
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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