STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46080.1NlpC/P60 family protein; KEGG: bat:BAS5084 6.5e-18 N-acetylmuramoyl-L-alanine amidase, C-terminus K01446; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.55. (747 aa)    
Predicted Functional Partners:
EDR46078.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
 
     0.942
EDR47098.1
Hypothetical protein.
  
 
 0.899
EDR46076.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.876
EDR46084.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.875
radC-2
DNA repair protein RadC; KEGG: vfi:VFB02 4.1e-07 traC; DNA primase TraC; COG: NOG17367 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.860
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.855
EDR46083.1
Hypothetical protein; COG: NOG33085 non supervised orthologous group.
 
     0.842
EDR48445.1
Putative regulatory protein blaR1; KEGG: bsu:BG11507 3.6e-40 ybxI, ybdS; similar to beta-lactamase K01467; COG: COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
    
  0.829
blaI
Penicillinase repressor; KEGG: bcz:BCZK0993 4.0e-25 blaI; beta-lactamase (penicillinase) repressor K01467; COG: COG3682 Predicted transcriptional regulator.
    
  0.825
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.824
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.