STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46085.1Hypothetical protein; KEGG: pai:PAE2758 0.0065 cation-transporting ATPase (P-type) K01529. (71 aa)    
Predicted Functional Partners:
EDR46084.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.935
EDR46082.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Cytoplasmic, score: 8.87.
 
     0.903
EDR46083.1
Hypothetical protein; COG: NOG33085 non supervised orthologous group.
 
     0.893
EDR46895.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
 
     0.773
EDR45433.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.766
EDR46447.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score: 8.87.
 
     0.761
EDR47863.1
Methyltransferase domain protein; KEGG: btk:BT9727_3407 2.9e-16 possible ubiquinone/menaquinone methyltransferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score: 8.87.
    
  0.733
EDR46088.1
TraG/TraD family protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score: 8.87.
 
     0.726
EDR45452.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score: 8.87.
 
     0.725
EDR46898.1
TraG/TraD family protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score: 8.87.
 
     0.716
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.