STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46113.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (98 aa)    
Predicted Functional Partners:
EDR46112.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.786
repA
Replication initiator protein A domain protein; COG: NOG34358 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.784
EDR46115.1
ParB-like protein; KEGG: pub:SAR11_0354 2.5e-14 parB; chromosome partitioning protein K03497; COG: COG1475 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87; Belongs to the ParB family.
       0.559
EDR46116.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: cch:Cag_1803 3.3e-46 ATPase, ParA family K03496; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score: 8.87.
       0.559
EDR46117.1
ParB-like protein; KEGG: pub:SAR11_0354 8.4e-06 parB; chromosome partitioning protein K03497; COG: COG1475 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87; Belongs to the ParB family.
       0.541
EDR46111.1
Hydrolase, NUDIX family; KEGG: bcl:ABC0282 5.5e-44 ADP-ribose pyrophosphatase K01515; COG: COG1051 ADP-ribose pyrophosphatase; Psort location: Cytoplasmic, score: 8.87.
       0.477
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.