STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46118.1LPXTG-motif cell wall anchor domain protein; KEGG: efa:EF1519 9.9e-05 cation-transporting ATPase, E1-E2 family; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 10.00. (1016 aa)    
Predicted Functional Partners:
EDR46146.1
Hypothetical protein; COG: NOG21981 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.693
EDR46460.1
Ser/Thr phosphatase family protein; COG: COG2129 Predicted phosphoesterases, related to the Icc protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.567
EDR46469.1
Transcriptional regulator, AraC family; KEGG: bce:BC3740 6.1e-10 ADA regulatory protein K00567; COG: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; Psort location: Cytoplasmic, score: 8.87.
  
     0.545
EDR46145.1
Sigma-70, region 4; KEGG: btl:BALH_3229 3.7e-06 sigW; RNA polymerase sigma-70 factor, ECF subfamily K00960; COG: NOG16920 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
    0.533
EDR45634.1
Hypothetical protein; COG: COG3937 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.523
pyk
Pyruvate kinase; KEGG: tte:TTE1815 2.8e-136 pykF; pyruvate kinase K00873; COG: COG0469 Pyruvate kinase; Psort location: Cytoplasmic, score: 8.87.
   
    0.512
EDR47781.1
Hypothetical protein; KEGG: cpf:CPF_2806 4.3e-06 putative foldase protein PrsA K07533; COG: COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.472
EDR46119.1
Hypothetical protein; COG: NOG10998 non supervised orthologous group.
       0.470
EDR46120.1
Hypothetical protein; COG: NOG13239 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.448
EDR46468.1
KEGG: rru:Rru_A0864 7.8e-77 ABC transporter, transmembrane region K06020; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.436
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.