Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EDR46125.1DNA-binding helix-turn-helix protein; COG: COG2946 Putative phage replication protein RstA; Psort location: Cytoplasmic, score: 8.87. (410 aa)    
Predicted Functional Partners:
EDR46127.1
Hypothetical protein; COG: NOG13238 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
 
     0.947
EDR46133.1
Hypothetical protein; COG: NOG05968 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.885
EDR46129.1
Hypothetical protein; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.858
EDR46130.1
Hypothetical protein; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.850
EDR46131.1
Antirestriction protein ArdA; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.848
EDR46120.1
Hypothetical protein; COG: NOG13239 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.831
EDR46482.1
Hypothetical protein; COG: NOG13239 non supervised orthologous group.
 
  
 0.830
EDR46134.1
Hypothetical protein; KEGG: xtr:407915 0.0052 ppig; peptidyl-prolyl isomerase G (cyclophilin G) K01802; COG: NOG05967 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.823
EDR46132.1
Hypothetical protein; COG: NOG10997 non supervised orthologous group.
 
     0.817
EDR46136.1
Hypothetical protein; COG: NOG08579 non supervised orthologous group.
 
     0.804
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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