STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46127.1Hypothetical protein; COG: NOG13238 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75. (73 aa)    
Predicted Functional Partners:
EDR46125.1
DNA-binding helix-turn-helix protein; COG: COG2946 Putative phage replication protein RstA; Psort location: Cytoplasmic, score: 8.87.
 
    0.949
EDR46129.1
Hypothetical protein; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.872
EDR46131.1
Antirestriction protein ArdA; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.868
EDR46130.1
Hypothetical protein; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.867
EDR46133.1
Hypothetical protein; COG: NOG05968 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.851
EDR46132.1
Hypothetical protein; COG: NOG10997 non supervised orthologous group.
 
    0.848
EDR46134.1
Hypothetical protein; KEGG: xtr:407915 0.0052 ppig; peptidyl-prolyl isomerase G (cyclophilin G) K01802; COG: NOG05967 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.836
EDR46136.1
Hypothetical protein; COG: NOG08579 non supervised orthologous group.
 
    0.826
EDR46135.1
NlpC/P60 family protein; KEGG: ssn:SSO_1501 7.1e-17 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
 
    0.820
EDR46474.1
Hypothetical protein; COG: NOG10997 non supervised orthologous group.
 
    0.800
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.