STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46146.1Hypothetical protein; COG: NOG21981 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (62 aa)    
Predicted Functional Partners:
EDR46145.1
Sigma-70, region 4; KEGG: btl:BALH_3229 3.7e-06 sigW; RNA polymerase sigma-70 factor, ECF subfamily K00960; COG: NOG16920 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.907
EDR46136.1
Hypothetical protein; COG: NOG08579 non supervised orthologous group.
 
    0.787
EDR46134.1
Hypothetical protein; KEGG: xtr:407915 0.0052 ppig; peptidyl-prolyl isomerase G (cyclophilin G) K01802; COG: NOG05967 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.767
EDR46470.1
Hypothetical protein; COG: NOG08579 non supervised orthologous group.
  
    0.742
EDR46463.1
Sigma-70, region 4; COG: NOG16920 non supervised orthologous group.
 
    0.732
EDR46118.1
LPXTG-motif cell wall anchor domain protein; KEGG: efa:EF1519 9.9e-05 cation-transporting ATPase, E1-E2 family; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 10.00.
  
     0.693
EDR46472.1
Hypothetical protein; KEGG: sha:SH0168 3.0e-06 lip; putative triacylglycerol lipase precursor; K01046 triacylglycerol lipase K01046; COG: NOG05967 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.692
EDR46129.1
Hypothetical protein; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.666
EDR46135.1
NlpC/P60 family protein; KEGG: ssn:SSO_1501 7.1e-17 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
 
     0.666
EDR46484.1
Cna protein B-type domain protein; KEGG: ddi:DDB0191487 0.00014 kinX; LISK family protein kinase K05743; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 9.26.
  
     0.648
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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