STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
EDR46164.1Oxidoreductase, 2-nitropropane dioxygenase family protein; KEGG: fnu:FN0664 2.0e-64 2-nitropropane dioxygenase K00459; COG: COG2070 Dioxygenases related to 2-nitropropane dioxygenase; Psort location: Cytoplasmic, score: 8.87. (370 aa)    
Predicted Functional Partners:
fabF
Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
  
 0.708
fabD
[acyl-carrier-protein] S-malonyltransferase; KEGG: cac:CAC3575 2.9e-77 fabD; malonyl CoA-acyl carrier protein transacylase K00645; COG: COG0331 (acyl-carrier-protein) S-malonyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.645
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.480
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.480
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
 
  
 0.457
EDR46555.1
Putative enoyl-[acyl-carrier-protein] reductase II; KEGG: ctc:CTC00128 1.4e-102 enoyl-[acyl-carrier protein] reductase (NADH) K02371; COG: COG2070 Dioxygenases related to 2-nitropropane dioxygenase; Psort location: Cytoplasmic, score: 8.87.
 
   
0.450
fabHA
Beta-ketoacyl-acyl-carrier-protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
 
  
 0.445
EDR46165.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.439
EDR46166.1
Hypothetical protein; COG: NOG16902 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.439
EDR48467.1
Hypothetical protein; KEGG: lla:L90005 2.3e-06 dltC; D-alanyl carrier protein K03367; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.436
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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