Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR46241.1Hypothetical protein; COG: NOG13728 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (295 aa)    
Predicted Functional Partners:
EDR45721.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.637
EDR48218.1
Hypothetical protein; KEGG: abo:ABO_0442 8.9e-07 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.87.
 
    0.593
EDR46029.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: chu:CHU_3089 1.7e-59 evgS; sensor histidine kinase/response regulator fusion protein; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.585
EDR45838.1
Hypothetical protein; COG: COG5464 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.565
EDR47865.1
Hypothetical protein; COG: NOG08812 non supervised orthologous group.
  
     0.543
EDR48602.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
  
     0.534
EDR45761.1
Hypothetical protein; KEGG: poy:PAM621 0.0045 uvrD; ATP-dependent DNA helicase K03657; COG: KOG1181 FOG: Low-complexity; Psort location: Cytoplasmic, score: 8.87.
 
     0.532
EDR48400.1
Hypothetical protein; COG: COG5464 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.528
EDR46240.1
Hypothetical protein.
       0.526
EDR48419.1
HD domain protein; KEGG: ava:Ava_1777 1.5e-43 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score: 8.87.
   
    0.519
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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