STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46325.1Oxidoreductase, NAD-binding domain protein; KEGG: rba:RB7494 6.7e-09 probable NADH-dependent dyhydrogenase related protein; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score: 8.87. (406 aa)    
Predicted Functional Partners:
EDR46324.1
AP endonuclease, family 2; KEGG: ret:RHE_PF00383 5.3e-07 putative epimerase protein K01820; COG: COG1082 Sugar phosphate isomerases/epimerases; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.998
EDR46788.1
GHMP kinase, N-terminal domain protein; KEGG: dde:Dde_3653 3.7e-70 galactokinase K00849; COG: COG0153 Galactokinase; Psort location: Cytoplasmic, score: 8.87; Belongs to the GHMP kinase family.
  
 0.923
EDR45358.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: bca:BCE_1397 3.1e-121 ywdH; aldehyde dehydrogenase K00128; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.861
lysS
lysine--tRNA ligase; KEGG: tte:TTE2372 2.7e-161 lysU; lysyl-tRNA synthetase class II K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.761
EDR47352.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: cpe:CPE2531 0. adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase K00001:K04072; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.753
EDR45526.1
KEGG: bth:BT0383 1.4e-141 putative UDP-N-acetylglucosamine 2-epimerase K01791; COG: COG0381 UDP-N-acetylglucosamine 2-epimerase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.745
rfbB
KEGG: ljo:LJ1049 1.5e-153 dTDP-D-glucose 4,6-dehydratase K01710; COG: COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.728
EDR46326.1
KEGG: bca:BCE_5014 8.9e-21 hydrolase, alpha/beta fold family K08680; COG: COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Psort location: Cytoplasmic, score: 9.36.
  
 
 0.714
EDR47968.1
Phosphoribulokinase/uridine kinase family protein; KEGG: cpe:CPE1347 1.3e-122 probable uridine kinase K00876; COG: COG0572 Uridine kinase; Psort location: Cytoplasmic, score: 8.87.
    
  0.672
EDR48227.1
Hypothetical protein; KEGG: lil:LA0051 0.0019 dTDPglucose 4,6-dehydratase K01710; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.667
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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