Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR46332.1GIY-YIG catalytic domain protein; KEGG: mca:MCA0838 1.7e-05 type I restriction-modification system, R subunit K01153; COG: COG2827 Predicted endonuclease containing a URI domain; Psort location: Cytoplasmic, score: 8.87. (101 aa)    
Predicted Functional Partners:
EDR46331.1
Pilin isopeptide linkage domain protein; KEGG: mmr:Mmar10_2493 2.3e-07 serralysin K01406; COG: NOG22929 non supervised orthologous group; Psort location: Cellwall, score: 9.26.
       0.645
EDR46330.1
Hypothetical protein.
       0.498
EDR46210.1
Methyltransferase domain protein; KEGG: ctc:CTC00225 1.7e-51 methyltransferase K00599; COG: COG4123 Predicted O-methyltransferase; Psort location: Cytoplasmic, score: 8.87; Belongs to the methyltransferase superfamily.
  
  
 0.459
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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