STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46403.1YhhN-like protein; COG: COG3714 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. (214 aa)    
Predicted Functional Partners:
EDR46402.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR48093.1
Phage terminase, large subunit, PBSX family; COG: COG1783 Phage terminase large subunit; Psort location: Cytoplasmic, score: 8.87.
  
     0.628
EDR47639.1
Bacteriophage Gp15 protein; COG: NOG24969 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.551
EDR48273.1
Hypothetical protein; KEGG: eci:UTI89_C1627 1.5e-05 entS; EntS/YbdA MFS transporter; COG: NOG04032 non supervised orthologous group; Psort location: Cellwall, score: 9.98.
  
     0.541
EDR47629.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.501
EDR45506.1
Hypothetical protein; COG: NOG13188 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.490
EDR45820.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.460
fbp-2
KEGG: cno:NT01CX_1512 2.5e-167 fructose-1,6-bisphosphatase K01086; COG: COG3855 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
       0.445
EDR46404.1
Hypothetical protein.
       0.425
EDR47640.1
Phage tail tape measure protein, TP901 family; KEGG: cal:orf19.4072 8.4e-09 HYR10; similar to cell surface flocculin K01186; COG: COG5283 Phage-related tail protein; Psort location: Cellwall, score: 9.17.
  
     0.401
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.