STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46408.1ABC transporter, ATP-binding protein; KEGG: cch:Cag_1327 5.4e-69 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00. (743 aa)    
Predicted Functional Partners:
EDR46409.1
KEGG: reh:H16_A0776 2.0e-87 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 
0.879
EDR46407.1
Transcriptional regulator, MarR family; KEGG: aci:ACIAD1561 0.0063 putative nitrilotriacetate monooxygenase component B (NtaB) K00492; COG: COG1846 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
       0.601
EDR46793.1
ABC transporter, ATP-binding protein; KEGG: hhe:HH0347 5.7e-81 glnQ_1; conserved hypothetical protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.483
EDR45978.1
KEGG: reh:H16_A0776 2.7e-83 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.480
EDR46410.1
COG: COG3584 Uncharacterized protein conserved in bacteria.
       0.470
EDR46574.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 3.7e-77 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.454
EDR45622.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1482 4.2e-85 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.443
EDR48157.1
Hypothetical protein; KEGG: lsl:LSL_0888 3.1e-41 arsC; arsenate reductase; COG: COG0394 Protein-tyrosine-phosphatase; Psort location: Cytoplasmic, score: 8.87; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
 
   0.430
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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