STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46413.1Hypothetical protein; COG: NOG17507 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (214 aa)    
Predicted Functional Partners:
EDR46192.1
Hypothetical protein.
  
     0.658
EDR47246.1
Hypothetical protein.
  
     0.594
EDR47298.1
Hypothetical protein; KEGG: sec:SC1961 4.7e-11 fliB; N-methylation of lysine residues in flagellin K00599; COG: NOG18602 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.582
EDR47098.1
Hypothetical protein.
  
     0.528
EDR47118.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.504
EDR46414.1
TrpR family protein YerC/YecD; COG: COG4496 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
       0.493
EDR47433.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.446
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
   0.439
EDR46292.1
Septum formation initiator; Psort location: Cytoplasmic, score: 8.87.
  
     0.404
EDR47122.1
Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.401
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.