Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDR46418.1 | EDR46419.1 | DORFOR_03030 | DORFOR_03031 | Hypothetical protein; COG: NOG13858 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein. | 0.518 |
EDR46418.1 | EDR46420.1 | DORFOR_03030 | DORFOR_03032 | Hypothetical protein; COG: NOG13858 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein. | 0.518 |
EDR46418.1 | EDR46421.1 | DORFOR_03030 | DORFOR_03033 | Hypothetical protein; COG: NOG13858 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lin:lin2827 2.5e-53 similar to the two components sensor protein kdpD K07646; COG: COG2205 Osmosensitive K+ channel histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99. | 0.518 |
EDR46418.1 | EDR46422.1 | DORFOR_03030 | DORFOR_03034 | Hypothetical protein; COG: NOG13858 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. | Response regulator receiver domain protein; KEGG: eci:UTI89_C0698 1.8e-45 kdpE; transcriptional regulatory protein KdpE K07667; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98. | 0.573 |
EDR46418.1 | pcrA | DORFOR_03030 | DORFOR_03036 | Hypothetical protein; COG: NOG13858 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. | KEGG: efa:EF0721 4.4e-186 pcrA; ATP-dependent DNA helicase PcrA K03657; COG: COG0210 Superfamily I DNA and RNA helicases; Psort location: Cytoplasmic, score: 8.87. | 0.507 |
EDR46419.1 | EDR46418.1 | DORFOR_03031 | DORFOR_03030 | Hypothetical protein. | Hypothetical protein; COG: NOG13858 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. | 0.518 |
EDR46419.1 | EDR46420.1 | DORFOR_03031 | DORFOR_03032 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EDR46419.1 | EDR46421.1 | DORFOR_03031 | DORFOR_03033 | Hypothetical protein. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lin:lin2827 2.5e-53 similar to the two components sensor protein kdpD K07646; COG: COG2205 Osmosensitive K+ channel histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99. | 0.773 |
EDR46419.1 | EDR46422.1 | DORFOR_03031 | DORFOR_03034 | Hypothetical protein. | Response regulator receiver domain protein; KEGG: eci:UTI89_C0698 1.8e-45 kdpE; transcriptional regulatory protein KdpE K07667; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98. | 0.773 |
EDR46419.1 | EDR46423.1 | DORFOR_03031 | DORFOR_03035 | Hypothetical protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | 0.507 |
EDR46419.1 | pcrA | DORFOR_03031 | DORFOR_03036 | Hypothetical protein. | KEGG: efa:EF0721 4.4e-186 pcrA; ATP-dependent DNA helicase PcrA K03657; COG: COG0210 Superfamily I DNA and RNA helicases; Psort location: Cytoplasmic, score: 8.87. | 0.507 |
EDR46420.1 | EDR46418.1 | DORFOR_03032 | DORFOR_03030 | Hypothetical protein. | Hypothetical protein; COG: NOG13858 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. | 0.518 |
EDR46420.1 | EDR46419.1 | DORFOR_03032 | DORFOR_03031 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EDR46420.1 | EDR46421.1 | DORFOR_03032 | DORFOR_03033 | Hypothetical protein. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lin:lin2827 2.5e-53 similar to the two components sensor protein kdpD K07646; COG: COG2205 Osmosensitive K+ channel histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99. | 0.773 |
EDR46420.1 | EDR46422.1 | DORFOR_03032 | DORFOR_03034 | Hypothetical protein. | Response regulator receiver domain protein; KEGG: eci:UTI89_C0698 1.8e-45 kdpE; transcriptional regulatory protein KdpE K07667; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98. | 0.773 |
EDR46420.1 | EDR46423.1 | DORFOR_03032 | DORFOR_03035 | Hypothetical protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | 0.507 |
EDR46420.1 | pcrA | DORFOR_03032 | DORFOR_03036 | Hypothetical protein. | KEGG: efa:EF0721 4.4e-186 pcrA; ATP-dependent DNA helicase PcrA K03657; COG: COG0210 Superfamily I DNA and RNA helicases; Psort location: Cytoplasmic, score: 8.87. | 0.507 |
EDR46421.1 | EDR46418.1 | DORFOR_03033 | DORFOR_03030 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lin:lin2827 2.5e-53 similar to the two components sensor protein kdpD K07646; COG: COG2205 Osmosensitive K+ channel histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99. | Hypothetical protein; COG: NOG13858 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. | 0.518 |
EDR46421.1 | EDR46419.1 | DORFOR_03033 | DORFOR_03031 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lin:lin2827 2.5e-53 similar to the two components sensor protein kdpD K07646; COG: COG2205 Osmosensitive K+ channel histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99. | Hypothetical protein. | 0.773 |
EDR46421.1 | EDR46420.1 | DORFOR_03033 | DORFOR_03032 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lin:lin2827 2.5e-53 similar to the two components sensor protein kdpD K07646; COG: COG2205 Osmosensitive K+ channel histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99. | Hypothetical protein. | 0.773 |
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