STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46470.1Hypothetical protein; COG: NOG08579 non supervised orthologous group. (301 aa)    
Predicted Functional Partners:
EDR45820.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
  
 0.986
EDR46471.1
NlpC/P60 family protein; KEGG: ssn:SSO_1501 3.4e-18 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
 
 
   0.947
EDR46472.1
Hypothetical protein; KEGG: sha:SH0168 3.0e-06 lip; putative triacylglycerol lipase precursor; K01046 triacylglycerol lipase K01046; COG: NOG05967 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.944
EDR46473.1
Hypothetical protein; COG: NOG05968 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.942
EDR46474.1
Hypothetical protein; COG: NOG10997 non supervised orthologous group.
 
    0.942
EDR48011.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.898
EDR46475.1
Antirestriction protein ArdA; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.875
EDR46476.1
Antirestriction protein ArdA; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.863
EDR46479.1
Hypothetical protein; COG: NOG13238 non supervised orthologous group.
 
    0.837
EDR46480.1
DNA-binding helix-turn-helix protein; COG: COG2946 Putative phage replication protein RstA; Psort location: Cytoplasmic, score: 8.87.
 
    0.815
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.