STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46471.1NlpC/P60 family protein; KEGG: ssn:SSO_1501 3.4e-18 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73. (334 aa)    
Predicted Functional Partners:
EDR46472.1
Hypothetical protein; KEGG: sha:SH0168 3.0e-06 lip; putative triacylglycerol lipase precursor; K01046 triacylglycerol lipase K01046; COG: NOG05967 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.948
EDR46470.1
Hypothetical protein; COG: NOG08579 non supervised orthologous group.
 
 
   0.947
EDR46473.1
Hypothetical protein; COG: NOG05968 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.946
EDR46474.1
Hypothetical protein; COG: NOG10997 non supervised orthologous group.
 
    0.944
EDR46475.1
Antirestriction protein ArdA; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.872
EDR46133.1
Hypothetical protein; COG: NOG05968 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.853
EDR46476.1
Antirestriction protein ArdA; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.843
EDR46479.1
Hypothetical protein; COG: NOG13238 non supervised orthologous group.
 
    0.829
EDR46482.1
Hypothetical protein; COG: NOG13239 non supervised orthologous group.
 
    0.819
EDR46481.1
FtsK/SpoIIIE family protein; COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Psort location: CytoplasmicMembrane, score: 7.80.
 
    0.804
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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