Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR46482.1Hypothetical protein; COG: NOG13239 non supervised orthologous group. (130 aa)    
Predicted Functional Partners:
EDR46481.1
FtsK/SpoIIIE family protein; COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Psort location: CytoplasmicMembrane, score: 7.80.
 
  
 0.947
EDR46483.1
Hypothetical protein; COG: NOG10998 non supervised orthologous group.
 
     0.941
EDR46480.1
DNA-binding helix-turn-helix protein; COG: COG2946 Putative phage replication protein RstA; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.877
EDR46479.1
Hypothetical protein; COG: NOG13238 non supervised orthologous group.
 
     0.849
EDR46125.1
DNA-binding helix-turn-helix protein; COG: COG2946 Putative phage replication protein RstA; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.830
EDR46475.1
Antirestriction protein ArdA; COG: NOG09588 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.826
EDR46471.1
NlpC/P60 family protein; KEGG: ssn:SSO_1501 3.4e-18 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.73.
 
    0.824
EDR46133.1
Hypothetical protein; COG: NOG05968 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.820
EDR46473.1
Hypothetical protein; COG: NOG05968 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.809
EDR46122.1
FtsK/SpoIIIE family protein; COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.808
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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