STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46485.1Hypothetical protein; COG: COG3177 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87. (189 aa)    
Predicted Functional Partners:
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
   0.683
EDR46654.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
    
   0.683
EDR46849.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
    
   0.683
EDR46486.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.610
EDR46033.1
Hypothetical protein; COG: COG1373 Predicted ATPase (AAA+ superfamily); Psort location: Cytoplasmic, score: 8.87.
 
     0.527
EDR46484.1
Cna protein B-type domain protein; KEGG: ddi:DDB0191487 0.00014 kinX; LISK family protein kinase K05743; COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 9.26.
       0.480
EDR46487.1
Hypothetical protein.
       0.443
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
   0.402
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.