STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR46501.1MATE efflux family protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99. (464 aa)    
Predicted Functional Partners:
EDR46502.1
Putative FeS-containing Cyanobacterial-specific oxidoreductase; COG: COG1625 Fe-S oxidoreductase, related to NifB/MoaA family; Psort location: Cytoplasmic, score: 8.87.
       0.655
EDR46500.1
Kinase, PfkB family; KEGG: pac:PPA0370 3.1e-121 carbohydrate kinase, PfkB family K00874; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score: 8.87.
       0.639
EDR47480.1
MATE domain protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.545
EDR46503.1
KEGG: mle:ML2279 1.9e-05 putative transmembrane transport protein K01672; COG: COG2233 Xanthine/uracil permeases; Psort location: CytoplasmicMembrane, score: 10.00.
       0.430
EDR46499.1
Hypothetical protein; KEGG: bba:Bd3704 3.0e-20 putative zinc metallo protease; COG: COG1451 Predicted metal-dependent hydrolase; Psort location: Cytoplasmic, score: 8.87.
  
    0.411
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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