STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45361.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lwe:lwe1394 6.1e-38 lisK; two-component sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.70. (386 aa)    
Predicted Functional Partners:
EDR45362.1
KEGG: rha:RHA1_ro05622 1.8e-36 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.55.
 
   0.969
EDR45365.1
Antioxidant, AhpC/TSA family; KEGG: reh:H16_A0306 3.7e-06 bcp; peroxiredoxin K00435; COG: COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.878
EDR45364.1
4Fe-4S binding domain protein; KEGG: eci:UTI89_C1055 1.4e-14 yccM; putative electron transport protein YccM K00168; COG: COG0348 Polyferredoxin; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.862
EDR48218.1
Hypothetical protein; KEGG: abo:ABO_0442 8.9e-07 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.842
EDR45363.1
Hypothetical protein.
 
     0.823
EDR46109.1
KEGG: rha:RHA1_ro05622 2.2e-33 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
 
   0.768
EDR48497.1
Response regulator receiver domain protein; KEGG: ava:Ava_3369 6.0e-31 two component transcriptional regulator, winged helix family; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
  
   0.753
EDR46390.1
KEGG: rha:RHA1_ro05622 1.9e-34 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
  
   0.753
EDR48271.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 2.5e-32 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
  
   0.687
EDR47326.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C0420 4.5e-42 phoB; positive response regulator for pho regulon K07657; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
  
   0.687
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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