STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45363.1Hypothetical protein. (46 aa)    
Predicted Functional Partners:
EDR45364.1
4Fe-4S binding domain protein; KEGG: eci:UTI89_C1055 1.4e-14 yccM; putative electron transport protein YccM K00168; COG: COG0348 Polyferredoxin; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.911
EDR45365.1
Antioxidant, AhpC/TSA family; KEGG: reh:H16_A0306 3.7e-06 bcp; peroxiredoxin K00435; COG: COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.890
EDR45361.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lwe:lwe1394 6.1e-38 lisK; two-component sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.70.
 
     0.825
EDR45362.1
KEGG: rha:RHA1_ro05622 1.8e-36 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.55.
 
     0.719
EDR46874.1
Hypothetical protein; COG: NOG21981 non supervised orthologous group.
  
     0.500
EDR46611.1
Redoxin family protein; KEGG: mbo:Mb1506 0.00017 trxB1; probable thioredoxin TrxB1; COG: COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.494
EDR46887.1
Hypothetical protein; COG: NOG17367 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.475
EDR46886.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.460
EDR45360.1
KEGG: ret:RHE_PB00012 5.3e-78 probable ABC transporter, ATP-binding protein K06022; COG: COG0488 ATPase components of ABC transporters with duplicated ATPase domains; Psort location: CytoplasmicMembrane, score: 9.49.
       0.441
EDR46875.1
KEGG: bcz:BCZK3297 0.00049 RNA polymerase ECF-type sigma factor K03088; COG: NOG16920 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.438
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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