Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDR45389.1Relaxase/mobilization nuclease domain protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase); Psort location: Cytoplasmic, score: 8.87. (464 aa)    
Predicted Functional Partners:
EDR45394.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.779
EDR45465.1
Hypothetical protein.
  
     0.772
EDR45391.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.770
EDR45412.1
CHC2 zinc finger domain protein; KEGG: dde:Dde_2053 1.7e-10 DNA primase K02316; COG: NOG17367 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.768
EDR45411.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.766
EDR45413.1
Hypothetical protein.
  
     0.759
EDR45395.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.754
EDR45427.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
  
     0.749
EDR45469.1
Hypothetical protein.
  
     0.741
EDR45410.1
SNF2 family N-terminal domain protein; KEGG: chu:CHU_1468 5.2e-11 dpn; possible adenine-specific DNA methylase K00599; COG: COG4646 DNA methylase; Psort location: Extracellular, score: 7.50.
 
     0.740
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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