STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45425.1Resolvase, N-terminal domain protein; KEGG: pfa:PF10_0362 0.0098 DNA polymerase zeta catalytic subunit, putative K00961; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87. (640 aa)    
Predicted Functional Partners:
EDR45424.1
Hypothetical protein; KEGG: mag:amb4223 0.0019 GTP cyclohydrolase I K01495.
 
     0.864
EDR45426.1
DNA topoisomerase; KEGG: efa:EF2312 2.7e-145 topB-2; DNA topoisomerase III K03169; COG: COG0550 Topoisomerase IA; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR45422.1
Hypothetical protein.
 
     0.732
EDR45423.1
Hypothetical protein.
       0.586
EDR45427.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
       0.452
EDR45428.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.452
EDR45431.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Cytoplasmic, score: 8.87.
  
    0.417
EDR45429.1
Hypothetical protein; KEGG: sfl:SF1683 0.0024 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
       0.409
EDR45430.1
Hypothetical protein.
       0.409
EDR45432.1
Hypothetical protein; COG: NOG33085 non supervised orthologous group.
       0.409
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.