STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45432.1Hypothetical protein; COG: NOG33085 non supervised orthologous group. (151 aa)    
Predicted Functional Partners:
EDR45429.1
Hypothetical protein; KEGG: sfl:SF1683 0.0024 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.946
EDR45431.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Cytoplasmic, score: 8.87.
     0.941
EDR45433.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.926
EDR45427.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
 
     0.925
EDR45428.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.922
EDR45430.1
Hypothetical protein.
       0.784
EDR45394.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.775
EDR45465.1
Hypothetical protein.
 
     0.765
EDR46889.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
 
     0.750
EDR46890.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.726
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.