STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45455.1MobA/MobL family protein; KEGG: ret:RHE_PA00159 2.8e-37 traAa; conjugal transfer protein A K01144; COG: COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; Psort location: Cytoplasmic, score: 8.87. (498 aa)    
Predicted Functional Partners:
EDR45454.1
Hypothetical protein; KEGG: pfo:Pfl_0538 5.3e-05 DnaB helicase K02314; COG: NOG14428 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.943
EDR45453.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.864
EDR45461.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
 
     0.848
EDR45456.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.782
EDR45460.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.724
EDR48138.1
Hypothetical protein; KEGG: mge:MG_010 3.1e-05 DNA primase K02316.
 
    0.694
EDR45449.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.559
EDR45444.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.525
dnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.506
EDR45445.1
Hypothetical protein.
  
     0.503
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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