STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfTCobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (274 aa)    
Predicted Functional Partners:
ecfA-2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.998
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.997
EDR46451.1
BioY family protein; KEGG: oih:OB1717 6.5e-25 biotin synthase K01012; COG: COG1268 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.958
EDR46631.1
KEGG: cac:CAC0112 5.7e-26 glnQ; glutamine ABC transporter (ATP-binding protein) K02028; COG: COG1122 ABC-type cobalt transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.907
EDR46861.1
COG: COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; Psort location: CytoplasmicMembrane, score: 9.99.
     
  0.900
EDR46630.1
ABC transporter, ATP-binding protein; KEGG: fnu:FN1968 5.0e-27 hmuV; hemin transport system ATP-binding protein hmuV K02013; COG: COG1122 ABC-type cobalt transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.894
truA-3
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.858
EDR46862.1
ABC transporter, ATP-binding protein; KEGG: hpa:HPAG1_0253 8.8e-29 oligopeptide permease ATPase protein K00927; COG: COG1122 ABC-type cobalt transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.856
EDR46351.1
BioY family protein; KEGG: oih:OB1717 5.4e-14 biotin synthase K01012; COG: COG1268 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.856
EDR45359.1
COG: COG4720 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.839
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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