Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ecfAABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (283 aa)    
Predicted Functional Partners:
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.997
EDR46861.1
COG: COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.960
ecfA-2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.960
EDR46451.1
BioY family protein; KEGG: oih:OB1717 6.5e-25 biotin synthase K01012; COG: COG1268 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.945
EDR46343.1
COG: COG4684 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 
 0.813
EDR46629.1
COG: COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.809
EDR46351.1
BioY family protein; KEGG: oih:OB1717 5.4e-14 biotin synthase K01012; COG: COG1268 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 
 0.756
truA-3
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.748
EDR45359.1
COG: COG4720 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.699
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
 
    0.657
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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