STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDR45526.1KEGG: bth:BT0383 1.4e-141 putative UDP-N-acetylglucosamine 2-epimerase K01791; COG: COG0381 UDP-N-acetylglucosamine 2-epimerase; Psort location: Cytoplasmic, score: 8.87. (397 aa)    
Predicted Functional Partners:
EDR45525.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 9.7e-63 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.994
EDR45529.1
Polysaccharide biosynthesis protein; KEGG: saa:SAUSA300_0156 1.0e-106 cap5E; capsular polysaccharide biosynthesis protein Cap5E K01726; COG: COG1086 Predicted nucleoside-diphosphate sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.911
EDR45530.1
Polysaccharide biosynthesis protein; KEGG: rty:RT0526 0.00010 nuoN; NADH dehydrogenase (ubiquinone) subunit N K00343; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.732
EDR45534.1
Glycosyltransferase, group 1 family protein; KEGG: ava:Ava_1041 4.7e-38 glycosyl transferase, group 1 K00703; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.656
EDR47881.1
Polysaccharide biosynthesis protein; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.651
EDR45536.1
Hypothetical protein; COG: NOG21681 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.640
EDR45532.1
Glycosyltransferase, group 1 family protein; KEGG: mma:MM1946 2.8e-13 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.592
EDR45528.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: reh:H16_B0021 8.1e-11 acetyltransferase K00680; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score: 8.87.
 
    0.559
EDR47852.1
KEGG: tcx:Tcr_1675 1.1e-72 undecaprenyl-phosphate galactosephosphotransferase K03606; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.542
hisF
Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
  
    0.540
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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