STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR45556.1Hypothetical protein; KEGG: hma:rrnAC3152 0.00024 atpG; vacuolar (H+)-ATPase G subunit K02121. (118 aa)    
Predicted Functional Partners:
EDR45555.1
KEGG: dvu:DVU3332 3.6e-143 heavy metal translocating P-type ATPase; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.893
EDR45753.1
Hypothetical protein; KEGG: tde:TDE0008 0.00018 copper-translocating P-type ATPase K01533.
 
     0.437
EDR45557.1
Hypothetical protein; COG: NOG16891 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 7.80.
       0.431
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.