Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM52320.1Hypothetical protein; KEGG: gga:395456 0.079 PCSK5, PC6; proprotein convertase subtilisin/kexin type 5 K08654; COG: NOG16856 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (109 aa)    
Predicted Functional Partners:
EDM52321.1
Hypothetical protein; KEGG: ehi:27.t00035 0.43 DNA-directed RNA polymerase II subunit, putative K03015.
       0.705
EDM51779.1
Peptidase, S8/S53 family; KEGG: cpr:CPR_2070 1.2e-80 subtilase family protein; COG: COG1404 Subtilisin-like serine proteases.
  
     0.696
EDM50544.1
Putative peptidoglycan binding domain protein; KEGG: bli:BL01582 0.0090 blyAB; N-acetylmuramoyl-L-alanine amidase K01447; COG: NOG36567 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.604
EDM50194.1
Peptidase, S8/S53 family; KEGG: cpf:CPF_2369 1.5e-59 subtilase family protein; COG: COG1404 Subtilisin-like serine proteases; Psort location: Cytoplasmic, score: 8.87.
  
     0.600
thrS
threonine--tRNA ligase; KEGG: cpe:CPE2322 1.1e-226 thrS; threonine-tRNA ligase K01868; COG: COG0441 Threonyl-tRNA synthetase; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.514
EDM51456.1
Hypothetical protein; KEGG: ddi:DDB0186469 0.00024 hypothetical protein K01802; COG: NOG21930 non supervised orthologous group.
  
     0.483
EDM52342.1
Hypothetical protein; KEGG: lsl:LSL_0087 0.028 PTS system, mannose-specific IIC component K00890; COG: NOG23087 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.435
EDM50649.1
Hypothetical protein; KEGG: hhe:HH0618 0.18 lysC; aspartate kinase K00928.
  
     0.432
EDM52531.1
Conserved domain protein; KEGG: mpu:MYPU_5510 0.21 hpt; hypoxanTHIne-guanine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 8.87.
  
     0.426
EDM50651.1
Spore coat protein, CotS family; KEGG: cal:orf19.1648 3.4e-05 RAD50; DNA repair protein K01553; COG: NOG09979 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.426
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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