STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM52167.1Hypothetical protein; KEGG: fnu:FN0066 0.12 two component system histidine kinase. (711 aa)    
Predicted Functional Partners:
EDM52497.1
Hypothetical protein; KEGG: ehi:192.t00009 0.0075 recQ family helicase, putative K03654; COG: COG3906 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
  
     0.774
EDM52390.1
Hypothetical protein; KEGG: chy:CHY_1101 0.11 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435; Psort location: Cytoplasmic, score: 8.87.
  
     0.774
EDM52149.1
Hypothetical protein; KEGG: ecu:ECU10_1720 0.16 10_1720, 3-HYDROXY-3-METHYLGLUTARYL CoA REDUCTASE 1, HMD1_DICDI, gene found by Glimmer [Bad Olap 191 182 0] K00021.
  
     0.774
EDM50375.1
Hypothetical protein; KEGG: bga:BG0656 8.3e-05 recC; exodeoxyribonuclease V, gamma chain K03583; Psort location: Cytoplasmic, score: 8.87.
  
     0.774
EDM50376.1
Hypothetical protein; KEGG: mja:MJ0636 0.28 dihydrolipoamide dehydrogenase K00382; Psort location: Cytoplasmic, score: 8.87.
  
     0.774
EDM51772.1
Hypothetical protein; KEGG: cal:CaalfMp02 0.026 NAD6; NADH dehydrogenase subunit 6 K03884; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.773
EDM51317.1
Hypothetical protein; KEGG: pfa:PF11_0381 0.033 subtilisin-like protease 2.
  
     0.773
EDM50155.1
Putative cell division protein FtsL; KEGG: cal:orf19.6533 0.98 MSK1; mitochondrial lysine-tRNA synthetase K01871.
  
     0.773
EDM52532.1
Hypothetical protein; KEGG: poy:PAM188 0.028 Zn-dependent carboxypeptidase K01299; Psort location: Cytoplasmic, score: 8.87.
  
     0.772
EDM50934.1
Hypothetical protein; KEGG: hsa:275 0.69 AMT; aminomethyltransferase K00605; Psort location: Cytoplasmic, score: 8.87.
  
     0.772
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.