STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srtB-3Sortase, SrtB family; KEGG: hwa:HQ2859A 0.53 nrdA; ribonucleoside-diphosphate reductase alpha subunit (intein-containing) K00524; COG: COG4932 Predicted outer membrane protein. (1613 aa)    
Predicted Functional Partners:
EDM52022.1
Hypothetical protein; KEGG: cal:orf19.4072 0.0068 HYR10; similar to cell surface flocculin K01186; COG: NOG36404 non supervised orthologous group.
 
     0.880
EDM52020.1
Peptidase, M23 family; KEGG: rha:RHA1_ro11285 1.5e-27 probable peptidase K01423; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Extracellular, score: 9.55.
 
   
 0.873
EDM52009.1
Hypothetical protein; KEGG: ngo:NGO0451 0.992 putative replicative DNA helicase K02314; Psort location: Cytoplasmic, score: 8.87.
 
     0.798
EDM52002.1
Hypothetical protein; KEGG: cyb:CYB_1784 0.11 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; COG: COG2944 Predicted transcriptional regulator.
  
     0.772
EDM52004.1
Conserved domain protein; KEGG: bmf:BAB1_0721 0.65 short-chain dehydrogenase/reductase SDR:glucose/ribitol dehydrogenase K00059; COG: NOG16917 non supervised orthologous group.
  
     0.772
EDM52036.1
Hypothetical protein; KEGG: bxe:Bxe_A0556 0.29 THIamine-monophosphate kinase K00946; COG: NOG22899 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.772
EDM52000.1
Toprim domain protein; KEGG: cvi:CV3763 0.042 dnaG; DNA primase K02316; COG: NOG14428 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.769
EDM52005.1
Hypothetical protein; KEGG: dre:322089 0.84 ctps; CTP synthase K01937; Psort location: Cytoplasmic, score: 8.87.
  
     0.765
EDM51997.1
Hypothetical protein; KEGG: ppr:PBPRA1848 0.35 putative peptidase T K01258; Psort location: Cytoplasmic, score: 8.87.
  
     0.757
EDM52038.1
Hypothetical protein; KEGG: sce:YGR185C 0.90 TYS1; tyrosyl-tRNA synthetase, cytoplasmic K01866; Psort location: Cytoplasmic, score: 8.87.
  
     0.743
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.