Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM51269.1Hypothetical protein; KEGG: sso:SSO0726 0.21 2-haloalkanoic acid dehalogenase, putative K01560. (64 aa)    
Predicted Functional Partners:
EDM51268.1
Hypothetical protein; KEGG: ehi:142.t00005 0.043 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative K01001; Psort location: CytoplasmicMembrane, score: 9.75.
       0.773
EDM51270.1
Site-specific recombinase, phage integrase family; KEGG: gga:422027 0.50 LOC422027; similar to peptide meTHIonine sulfoxide reductase K07304; COG: COG0582 Integrase.
       0.565
EDM52106.1
Hypothetical protein; KEGG: mth:MTH977 2.0e-05 endo-1,4-beta-glucanase related protein K01179; COG: COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases.
  
 
 0.494
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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