STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM50994.1ABC transporter, solute-binding protein; KEGG: hpa:HPAG1_0451 3.9e-09 molybdenum ABC transporter ModB K06022; COG: COG0687 Spermidine/putrescine-binding periplasmic protein; Psort location: CytoplasmicMembrane, score: 10.00. (625 aa)    
Predicted Functional Partners:
EDM50995.1
KEGG: cya:CYA_1846 2.1e-09 modB; molybdate ABC transporter, permease protein K02018; COG: COG1176 ABC-type spermidine/putrescine transport system, permease component I; Psort location: CytoplasmicMembrane, score: 10.00.
 
0.999
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.999
EDM51138.1
KEGG: sth:STH1782 4.0e-112 sugar ABC transportor ATP-binding protein K05816; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49; Belongs to the ABC transporter superfamily.
 
  
 0.941
EDM50997.1
Cupin domain protein; KEGG: psp:PSPPH_2917 3.3e-06 DNA-binding protein K00517; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
 
 
 0.902
EDM51704.1
KEGG: ctc:CTC00579 1.5e-114 sbcC; exonuclease sbcC K03546; COG: COG0419 ATPase involved in DNA repair; Psort location: Cytoplasmic, score: 9.98.
    
 0.897
EDM50739.1
KEGG: pen:PSEEN0148 2.9e-54 ABC transporter, ATP-binding protein; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
    
  0.859
EDM51745.1
ABC transporter, permease protein; KEGG: syn:sll0739 0.54 modBC; ABC-type molybdate transport system permease/ATP-binding protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.841
EDM51032.1
ABC transporter, permease protein; KEGG: lwe:lwe0999 0.042 gbuB; glycine betaine/L-proline ABC transporter, permease protein; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.841
EDM51036.1
ABC transporter, permease protein; KEGG: cpr:CPR_1646 0.20 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.841
EDM50633.1
ABC transporter, permease protein; KEGG: eca:ECA2727 0.64 fruA, ptsF; pts system, fructose-specific IIbc component K02769:K02770; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.841
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.