STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM50673.1KEGG: ddi:DDB0216549 0.34 hypothetical protein K03654; COG: NOG18392 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (153 aa)    
Predicted Functional Partners:
EDM50672.1
Kinase domain protein; KEGG: ssp:SSP1552 1.2e-27 putative protein kinase K08884; COG: COG0515 Serine/threonine protein kinase; Psort location: Cytoplasmic, score: 9.91.
 
     0.650
EDM50671.1
Hypothetical protein; KEGG: chu:CHU_0326 0.0084 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.534
EDM51676.1
Hypothetical protein; KEGG: sce:YDL067C 0.995 COX9; Plays role in cytochrome c oxidase holoenzyme assembly or stability K02269; COG: NOG14245 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.530
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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