STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50746.1Sortase family protein; KEGG: pfa:PFE0485w 0.41 phosphatidylinositol 4-kinase, putative K00888; COG: COG3764 Sortase (surface protein transpeptidase). (171 aa)    
Predicted Functional Partners:
EDM50748.1
LPXTG-motif cell wall anchor domain protein; KEGG: sas:SAS1340 0.43 putative alanine racemase K01775; Psort location: Cytoplasmic, score: 8.87.
       0.636
EDM50749.1
Sortase family protein; KEGG: pfa:PFE0765w 0.0034 phosphatidylinositol 3-kinase, putative K00914; COG: COG3764 Sortase (surface protein transpeptidase).
 
     0.544
EDM50750.1
LPXTG-motif cell wall anchor domain protein; KEGG: chu:CHU_0804 0.0083 CHU large protein; uncharacterized K01238; COG: NOG22227 non supervised orthologous group; Psort location: Cellwall, score: 10.00.
 
   
 0.434
EDM52519.1
Hypothetical protein; KEGG: sso:SSO2015 0.00035 protease, putative K01423; Psort location: Cytoplasmic, score: 8.87.
  
     0.428
EDM50751.1
LPXTG-motif cell wall anchor domain protein; KEGG: cal:orf19.756 0.063 SAP7; secreted aspartyl proteinase 7; Psort location: Cellwall, score: 9.98.
 
   
 0.411
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.