STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50771.1Carbon starvation protein CstA; KEGG: nph:NP2304A 0.059 nuoJ1; NADH dehydrogenase-like complex, subunit J1 K00339; COG: COG1966 Carbon starvation protein, predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. (561 aa)    
Predicted Functional Partners:
EDM50770.1
Hypothetical protein; KEGG: cel:T11F9.6 0.71 nas-22; Nematode AStacin protease K08076; Psort location: Extracellular, score: 8.82.
       0.510
EDM51192.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_4171 2.3e-54 ribose transport system permease protein RbsC; COG: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.487
EDM50763.1
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; KEGG: eci:UTI89_C4668 1.5e-34 gltP; glutamate-aspartate symport protein K03309; COG: COG1823 Predicted Na+/dicarboxylate symporter; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
  
 0.468
EDM50767.1
Hypothetical protein; KEGG: cho:Chro.60017 0.070 CAAX prenyl protease; Psort location: CytoplasmicMembrane, score: 9.99.
       0.461
EDM50769.1
Hypothetical protein; KEGG: ctc:CTC02331 0.11 V-type sodium ATP synthase subunit I K02123; Psort location: Cytoplasmic, score: 8.87.
       0.461
EDM51203.1
Glucose/galactose-binding lipoprotein family protein; KEGG: msm:MSMEG_6020 0.084 D-xylose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component.
  
    0.433
feoB-2
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.420
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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