STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50832.1DNA-binding helix-turn-helix protein; KEGG: syw:SYNW1884 0.013 sppA; signal peptide peptidase SppA (protease IV) K04773; Psort location: Cytoplasmic, score: 8.87. (108 aa)    
Predicted Functional Partners:
EDM50831.1
Hypothetical protein; KEGG: btk:BT9727_4392 0.072 possible acetyltransferase, GNAT family K00680.
       0.773
EDM50830.1
Site-specific recombinase, phage integrase family; KEGG: bcl:ABC1027 0.18 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923; COG: COG4974 Site-specific recombinase XerD; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
       0.422
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.