STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM50852.1Hypothetical protein; KEGG: sfu:Sfum_2995 0.32 V-type H(+)-translocating pyrophosphatase K01507; Psort location: CytoplasmicMembrane, score: 9.26. (109 aa)    
Predicted Functional Partners:
EDM50853.1
TraG/TraD family protein; KEGG: cac:CAC3005 0.048 add; adenosine deaminase K01488; COG: COG3505 Type IV secretory pathway, VirD4 components.
       0.746
EDM50854.1
Reverse transcriptase (RNA-dependent DNA polymerase); KEGG: rha:RHA1_ro10191 9.0e-44 RNA-directed DNA polymerase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.
       0.473
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.