STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50450.1Hypothetical protein; KEGG: pfa:MAL13P1.278 0.00019 Ser/Thr protein kinase K00870; COG: COG5434 Endopolygalacturonase. (432 aa)    
Predicted Functional Partners:
EDM52541.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 3.9e-18 beta-N-acetylhexosaminidase K01207; COG: COG5498 Predicted glycosyl hydrolase; Psort location: Extracellular, score: 8.82.
  
     0.708
EDM51677.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 1.4e-36 beta-N-acetylhexosaminidase K01207; COG: COG5498 Predicted glycosyl hydrolase.
  
     0.706
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.693
EDM51729.1
Cellulase (glycosyl hydrolase family 5); KEGG: osa:4338201 1.8e-15 Os05g0244500 K01210; COG: COG2730 Endoglucanase.
  
   
 0.681
EDM50773.1
Methyltransferase domain protein; KEGG: chu:CHU_1226 8.6e-08 probable methyltransferase K00599; COG: COG4797 Predicted regulatory domain of a methyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
     0.626
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.586
EDM51215.1
Glycosyltransferase, group 2 family protein; KEGG: bcl:ABC3103 5.1e-89 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
     0.564
EDM51214.1
Glycosyltransferase, group 2 family protein; KEGG: bcl:ABC3103 7.0e-89 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; COG: COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC; Psort location: Cytoplasmic, score: 8.87.
  
     0.552
EDM49994.1
Hypothetical protein; KEGG: hma:rrnAC0616 0.038 pecE; pectinesterase K01051.
 
 
 
 0.544
EDM51490.1
HTH domain protein; KEGG: pmi:PMT9312_1254 0.81 cyclophilin-type peptidyl-prolyl cis-trans isomerase K03767; COG: COG2378 Predicted transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
  
     0.536
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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