STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50458.1Hypothetical protein; KEGG: bpe:BP1797 0.11 ptpA; low molecular weight protein-tyrosine-phosphatase K01104; Psort location: Extracellular, score: 8.82. (59 aa)    
Predicted Functional Partners:
EDM50459.1
PAP2 family protein; KEGG: spk:MGAS9429_Spy1565 5.9e-24 phosphatidylglycerophosphatase B K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.768
EDM51640.1
Hypothetical protein; KEGG: lma:LmjF32.1500 0.22 ATP-dependent zinc metallopeptidase, putative.
  
     0.680
EDM50934.1
Hypothetical protein; KEGG: hsa:275 0.69 AMT; aminomethyltransferase K00605; Psort location: Cytoplasmic, score: 8.87.
  
     0.642
EDM50380.1
Tetratricopeptide repeat protein; KEGG: btl:BALH_3160 0.0019 possible response regulator aspartate phosphatase; COG: COG0500 SAM-dependent methyltransferases.
  
     0.642
EDM50375.1
Hypothetical protein; KEGG: bga:BG0656 8.3e-05 recC; exodeoxyribonuclease V, gamma chain K03583; Psort location: Cytoplasmic, score: 8.87.
  
     0.623
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.575
EDM52149.1
Hypothetical protein; KEGG: ecu:ECU10_1720 0.16 10_1720, 3-HYDROXY-3-METHYLGLUTARYL CoA REDUCTASE 1, HMD1_DICDI, gene found by Glimmer [Bad Olap 191 182 0] K00021.
  
     0.574
EDM50643.1
Hypothetical protein; KEGG: bms:BR0385 0.86 atpF; ATP synthase F0, B subunit K02109; Psort location: CytoplasmicMembrane, score: 9.75.
  
     0.571
EDM50161.1
PqqA family protein; KEGG: pfa:PFD0590c 0.029 DNA polymerase alpha K02320; COG: COG1589 Cell division septal protein.
  
     0.568
EDM52167.1
Hypothetical protein; KEGG: fnu:FN0066 0.12 two component system histidine kinase.
  
     0.551
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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