Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDM50459.1PAP2 family protein; KEGG: spk:MGAS9429_Spy1565 5.9e-24 phosphatidylglycerophosphatase B K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.99. (165 aa)    
Predicted Functional Partners:
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.820
EDM50458.1
Hypothetical protein; KEGG: bpe:BP1797 0.11 ptpA; low molecular weight protein-tyrosine-phosphatase K01104; Psort location: Extracellular, score: 8.82.
       0.768
EDM51275.1
KEGG: ctc:CTC02332 1.8e-38 V-type sodium ATP synthase subunit C K02119; COG: COG1527 Archaeal/vacuolar-type H+-ATPase subunit C; Psort location: Cytoplasmic, score: 8.87.
    
   0.694
EDM50603.1
KEGG: ctc:CTC00997 9.3e-26 V-type sodium ATP synthase subunit C K02119; COG: COG1527 Archaeal/vacuolar-type H+-ATPase subunit C; Psort location: Cytoplasmic, score: 8.87.
    
   0.694
EDM51731.1
AMP-binding enzyme; KEGG: bca:BCE_0965 6.7e-71 AMP-binding protein K01897; COG: COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; Psort location: Cytoplasmic, score: 9.96.
    
  0.678
EDM51512.1
AMP-binding enzyme; KEGG: gka:GK1491 2.0e-48 long-chain fatty-acid-CoA ligase K01897; COG: COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; Psort location: Cytoplasmic, score: 9.98.
    
  0.678
EDM51276.1
V-type ATPase 116kDa subunit family protein; KEGG: ctc:CTC02331 1.3e-74 V-type sodium ATP synthase subunit I K02123; COG: COG1269 Archaeal/vacuolar-type H+-ATPase subunit I; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the V-ATPase 116 kDa subunit family.
    
   0.567
ntpI
KEGG: ctc:CTC00994 6.8e-94 V-type sodium ATP synthase subunit I K02123; COG: COG1269 Archaeal/vacuolar-type H+-ATPase subunit I; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the V-ATPase 116 kDa subunit family.
    
   0.567
EDM50460.1
MATE efflux family protein; KEGG: lmf:LMOf2365_1681 0.051 PTS system, sucrose-specific, IIBC component K02809:K02810; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.478
EDM51278.1
KEGG: mth:MTH956 6.4e-11 ATP synthase, subunit F K02122; COG: COG1436 Archaeal/vacuolar-type H+-ATPase subunit F; Psort location: Cytoplasmic, score: 8.87.
    
   0.472
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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