Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50488.1KEGG: rru:Rru_A0863 3.5e-74 ABC transporter, transmembrane region K06020; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00. (557 aa)    
Predicted Functional Partners:
EDM50487.1
KEGG: pen:PSEEN2498 3.7e-70 ABC transporter, permease/ATP-binding protein; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 
0.965
EDM50486.1
Conserved domain protein; KEGG: btk:BT9727_0772 0.021 alsD; acetolactate decarboxylase K01575; COG: NOG38946 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.716
EDM51929.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL6466 1.4e-52 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
    
0.521
EDM50489.1
Hypothetical protein; KEGG: sat:SYN_00534 9.9e-05 phosphoesterase; Psort location: Cytoplasmic, score: 8.87.
       0.513
EDM50490.1
Hypothetical protein; KEGG: bam:Bamb_1036 0.067 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697.
       0.513
EDM50491.1
Conserved domain protein; KEGG: hpa:HPAG1_0403 9.8e-07 integral membrane protein; COG: COG1408 Predicted phosphohydrolases; Psort location: Cytoplasmic, score: 8.87.
       0.414
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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