STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50491.1Conserved domain protein; KEGG: hpa:HPAG1_0403 9.8e-07 integral membrane protein; COG: COG1408 Predicted phosphohydrolases; Psort location: Cytoplasmic, score: 8.87. (102 aa)    
Predicted Functional Partners:
EDM50489.1
Hypothetical protein; KEGG: sat:SYN_00534 9.9e-05 phosphoesterase; Psort location: Cytoplasmic, score: 8.87.
       0.605
EDM50490.1
Hypothetical protein; KEGG: bam:Bamb_1036 0.067 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K00697.
       0.605
EDM50492.1
Pyridoxamine 5'-phosphate oxidase family protein; KEGG: hpa:HPAG1_1080 0.94 hypothetical protein K01553; COG: COG3467 Predicted flavin-nucleotide-binding protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.539
EDM50723.1
CDP-alcohol phosphatidyltransferase; KEGG: ayw:AYWB_120 2.0e-30 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K00998; COG: COG1183 Phosphatidylserine synthase; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.477
psd
KEGG: cac:CAC0799 2.1e-60 psd; phosphatidylserine decarboxylase K01613; COG: COG0688 Phosphatidylserine decarboxylase; Psort location: Cytoplasmic, score: 8.87.
 
     0.433
EDM50488.1
KEGG: rru:Rru_A0863 3.5e-74 ABC transporter, transmembrane region K06020; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
       0.414
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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