STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM50497.1KEGG: bcz:BCZK3833 6.8e-07 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. (116 aa)    
Predicted Functional Partners:
EDM50498.1
KEGG: fal:FRAAL3746 9.4e-33 putative ABC transporter (ATP-binding protein); COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
    0.899
EDM50499.1
Hypothetical protein; KEGG: cpr:CPR_2207 0.018 sulfatase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.453
EDM50226.1
KEGG: afu:AF1021 1.7e-24 ABC transporter, ATP-binding protein K02017; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
    0.411
EDM50496.1
Hypothetical protein; KEGG: xoo:XOO1736 0.13 relA; ATP:GTP 3'-pyrophosphotranferase K00951.
       0.402
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.